All skills
Vercel CLI Deploy Assistant
Deploys web apps to Vercel non-interactively, manages domains and env vars, and verifies the live URL before sharing it.
Autoresearch Agent (Autonomous Experiment Loop)
An autonomous edit-measure-keep/revert loop that optimizes any file against a measurable metric using git as the safety net.
Add OpenCode Provider (NanoClaw)
Wires OpenCode (OpenRouter, DeepSeek, Zen, Anthropic) in as a per-group agent backend for NanoClaw instead of the Anthropic Agent SDK.
CAPA Officer (Corrective & Preventive Action)
An end-to-end CAPA playbook for medical device QMS: investigation workflow, root cause analysis, effectiveness verification, and program metrics.
Finish NanoClaw v1 → v2 Migration
Walks Claude through the human-judgment half of a NanoClaw v1→v2 upgrade: owner seeding, legacy memory, container config, and fork triage.
NanoClaw Upstream Update Assistant
Safely merges upstream NanoClaw changes into your customized fork with backups, conflict preview, and selective cherry-picking.
Distilly Person-Profile Workflow
A strict operating contract for building, updating and recalling evidence-grounded person profiles through Distilly's exact five MCP tools.
PyLabRobot Lab Automation Assistant
Design and review PyLabRobot 0.2.1 liquid-handling protocols offline, with every physical device command locked behind an explicit operator safety gate.
NCATS ARAX Biomedical Knowledge-Graph Lookup
Runs bounded one-hop and endpoint-pinned two-hop TRAPI queries against the NCATS Translator ARAX API and returns typed, provenance-rich biomedical relationships.
FluidSim CFD Simulation Guardrails
A rigorous workflow skill for planning, validating, restarting, and analyzing FluidSim 0.9 pseudospectral CFD runs with explicit numerical and HPC safety gates.
Parallel Web Intelligence Toolkit
Routes requests to the right Parallel CLI capability — web search, URL extraction, deep research, enrichment, entity discovery, or recurring monitoring.
Glycoengineering Analysis
Scans protein sequences for N-/O-glycosylation sites and guides glycan engineering strategies for antibodies and vaccine antigens.
DiffDock Molecular Docking Skill
Runs DiffDock/DiffDock-L to predict protein–small-molecule binding poses and interprets the confidence scores.
Phylogenetics Pipeline
Runs the standard phylogenetics workflow — MAFFT alignment, IQ-TREE 2/FastTree inference, and ETE3 tree analysis and rendering.
histolab WSI Tile Extraction Assistant
A guided skill for using histolab to detect tissue, extract tiles, and normalize stains from whole slide pathology images.
Paperzilla Paper Assistant
Lets your agent query Paperzilla projects, recommendation feeds, and canonical papers via the `pz` CLI, then summarize and give feedback.
scikit-survival Survival Analysis Workflow
An expert skill for building, tuning, evaluating, and reporting right-censored and competing-risk survival models with scikit-survival, without data leakage.