Data & Analytics
scikit-learn ML Assistant
A skill that guides classical machine learning in Python with scikit-learn — classification, regression, clustering, preprocessing, evaluation and tuning — following leakage-free best practices.
NetworkX Graph Analysis
A skill that guides Claude in building, analyzing, and visualizing networks and graphs with Python's NetworkX.
pyOpenMS Mass Spectrometry Workflows
Run end-to-end proteomics and metabolomics LC-MS/MS analysis with ready-made pyOpenMS CLI scripts.
SHAP Model Explanation Assistant
A skill that guides Claude through choosing SHAP explainers and maskers, computing, validating, and visualizing feature attributions on SHAP 0.52.
Exploratory Data Analysis (Safe Mode)
A fail-closed EDA skill that profiles authorized local scientific files, audits missingness, leakage and outliers, and drafts a rigorous report without exposing raw values.
Matplotlib Visualization Guide
A skill that steers Claude toward idiomatic Matplotlib code for publication-quality figures.
SimPy Discrete-Event Simulation
Build, test, and analyze bounded process-based discrete-event simulations in SimPy with correct event semantics and replication-based output analysis.
UMAP-learn Dimensionality Reduction Helper
Guides you through UMAP embeddings, parameter tuning, and clustering preprocessing with ready-to-run scikit-learn code.
deepTools NGS Analysis Assistant
Guides Claude through deepTools workflows for converting, QC-ing and visualizing ChIP-seq, RNA-seq and ATAC-seq data.
pysam Genomic File Toolkit
Correct, idiomatic pysam workflows for reading, querying, filtering, and writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, and tabix data.
Hugging Science Resource Finder
Discovers and applies curated Hugging Face datasets, models, and Spaces across 17 scientific domains, from protein design to climate modeling.
Statistical Power & Sample Size
Plans studies by computing required sample size, minimum detectable effect, and power curves via closed-form formulas or Monte Carlo simulation.
Pathway Enrichment Analysis
Runs ORA and (pre)ranked GSEA on gene lists or ranked gene tables across GO, KEGG, Reactome and MSigDB, then interprets and visualizes the results.
Huashu Data Pro — Analysis & Office Productivity Assistant
An end-to-end skill for Excel data processing, expert-level analysis, interactive HTML reports, and HTML-to-PPTX slide generation.
Analytical Method Validation (AMV)
Picks the governing framework (ICH Q2(R2)/M10, USP, CLSI, ISO 17025), then plans the validation study, runs the correct statistics, and structures the protocol and report.
AnnData Single-Cell Data Handler
A skill for creating, reading/writing, concatenating and scaling AnnData (.h5ad, Zarr) objects using the current 0.13.x API.
aeon Time Series Machine Learning
A skill that guides Claude through the scikit-learn-compatible aeon toolkit for time series classification, regression, clustering, forecasting and anomaly detection.
Google Maps Scraper
Turns a plain-English request like "find dentists in Berlin" into a validated, locally-run Docker crawl of Google Maps for business leads, contacts, and reviews.