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Ginkgo Cloud Lab Protocol Guide

A reference skill for picking, configuring and ordering automated wet-lab protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio).

UtilitiesIntermediate33,0303,248AI score 8/10Last updated: Aug 9, 2026

What it does

  • Presents the full Ginkgo Cloud Lab catalog — cell-free / E. coli / Pichia expression and purification, HiBiT, A280, LabChip, IVT mRNA/circRNA, thermal shift, Echo-MS, SPR onboarding, and specialty protocols — in comparable tables.
  • Lists readout, per-sample price, turnaround and Certified/Beta status for each protocol.
  • Walks through the standard ordering flow: select protocol → configure parameters → download and upload the input template (FASTA/CSV/XLSX) → add special requirements → get a feasibility report and quote.
  • Points to EstiMate for custom protocols outside the listed catalog.

Who it's for

  • Researchers outsourcing protein expression and purification without in-house automation.
  • Biotech teams screening de novo binders/minibinders, measuring enzyme activity, or synthesizing mRNA.
  • Project leads who need fast cost and turnaround estimates for planned experiments.

Example uses

  1. "Cheapest way to check if my sequence expresses" → recommends cell-free HiBiT or expression validation ($39/sample) and how to prepare inputs.
  2. "Difficult membrane/disulfide target" → suggests the 24-condition cell-free DoE optimization tier with price and timeline.
  3. "I need binding kinetics for my minibinders" → maps a path from minibinder expression/purification to SPR target onboarding.

· · · Install guide · · ·

Try it now, no install

Paste this into Claude to use the skill without installing anything.

Read the instructions in this file and follow them to help me:
https://raw.githubusercontent.com/K-Dense-AI/scientific-agent-skills/HEAD/skills/ginkgo-cloud-lab/SKILL.md

What I want: (describe your task here)

If Claude can't open the link, open it yourself and paste the contents instead.

If it works for you, download the ZIP below and install it. Then it runs on its own — no pasting each time.

Install in the Claude app (no terminal)
  1. Download the ZIP with the button below.
  2. In Claude, open Settings → Capabilities and turn on 'Code execution and file creation'. (one time)
  3. Go to Customize → Skills → + → 'Upload a skill' and upload the ZIP.
Download ZIP
Install in Claude Code

Let Claude do it — paste this into Claude Code

Install the skill I found on Claude Skill Mart.
Copy the skills/ginkgo-cloud-lab folder from the GitHub repo K-Dense-AI/scientific-agent-skills into my ~/.claude/skills/ginkgo-cloud-lab/.
When it's done, tell me in one line what this skill can do.

Install with a command instead

git clone https://github.com/K-Dense-AI/scientific-agent-skills.git /tmp/sas && mkdir -p ~/.claude/skills && cp -r /tmp/sas/skills/ginkgo-cloud-lab ~/.claude/skills/

This is a third-party skill. Check the source repository before installing.

  1. Open a terminal.
  2. Clone the repo: git clone https://github.com/K-Dense-AI/scientific-agent-skills.git
  3. Create the skills folder: mkdir -p ~/.claude/skills
  4. Copy this skill: cp -r scientific-agent-skills/skills/ginkgo-cloud-lab ~/.claude/skills/
  5. Verify the references/ subfolder came along with SKILL.md.
  6. Restart Claude Code and ask something like "Which Ginkgo Cloud Lab protocol should I use to purify my protein?".
  7. Ordering requires a cloud.ginkgo.bio account — sign up or confirm institutional access, and re-check current pricing on the site.