Guides Claude through LaminDB artifact registration, querying, validation, ontology annotation, and lineage tracking.
A research-grade skill for building and auditing reproducible ECG/EDA/RSP pipelines with NeuroKit2 0.2.13.
A Claude skill for querying the 1000 Genomes Project cohort (3,202 whole genomes, GRCh38) at the level of individual participants and variants.
Moves CPU-bound scientific Python to NVIDIA GPUs and proves the port is both correct and genuinely faster.
Extract, validate and post-process velocity fields from PIV image pairs, including vorticity, strain rate and turbulence statistics.
Validates inputs, generates pacsomatic samplesheets and launch artifacts, then runs or submits nf-core/pacsomatic tumor-normal analyses locally or on HPC schedulers.
An end-to-end guide for bulk RNA-seq differential expression with PyDESeq2 — formulaic designs, Wald tests, FDR correction, LFC shrinkage, and plots.
A skill that drives Rowan's cloud chemistry API to run pKa prediction, docking, conformer/tautomer searches, and protein–ligand cofolding from code.
A skill that guides building, training, and deploying differentiable quantum circuits with PennyLane.
Writes and debugs TorchDrug 0.2.1 code for molecular property prediction, generation, retrosynthesis, protein encoders, and knowledge graph reasoning.
A research-only skill for using PathML 3.0.5 to tile slides, build preprocessing/QC pipelines, quantify multiplex images, construct spatial graphs, and plan bounded local inference.
Guides Claude to analyze, edit, compare, annotate, and visualize existing phylogenetic trees with ETE 4.4.0.
Plans, audits, and cost-bounds ChicagoHAI HypoGeniC/HypoRefine hypothesis-generation runs entirely locally before any LLM call.
Version-aware guidance for PufferLib RL work — environment adaptation, vectorization, PuffeRL training, and safe checkpoint review across the 3.0.0 release and 4.0 source line.
Triage compound libraries with drug-likeness rules (Lipinski, Veber, CNS), PAINS/NIBR structural alerts, complexity metrics, and the medchem query language.
A skill for cleaning, filtering, comparing, and library-searching MS/MS spectra with the current matchms 0.33.1 API.
An end-to-end SpikeInterface workflow for Neuropixels recordings: loading, preprocessing, drift correction, spike sorting, quality metrics, and unit curation.
A routing-style skill for installing, configuring, and building on Pi, the minimal terminal coding harness.
A skill for building, running and monitoring reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets and workflow importers.
A Geniml-focused skill that validates BED/universe contracts and plans Region2Vec, scEmbed, and consensus-universe runs with safety and compatibility checks.