All skills
Scientific Writing
Draft, revise, and audit scientific manuscripts with enforced evidence provenance, reporting-guideline coverage, and authorship/disclosure checks.
pymatgen Materials Analysis
A rigorous skill for validating, converting, and symmetry-analyzing crystal structures with current pymatgen APIs, plus offline phase diagrams and bounded Materials Project queries.
PyMC Bayesian Modeling
An end-to-end PyMC workflow skill covering hierarchical models, NUTS/variational inference, convergence diagnostics, and LOO/WAIC model comparison.
pyOpenMS Mass Spectrometry Workflows
Run end-to-end proteomics and metabolomics LC-MS/MS analysis with ready-made pyOpenMS CLI scripts.
SHAP Model Explanation Assistant
A skill that guides Claude through choosing SHAP explainers and maskers, computing, validating, and visualizing feature attributions on SHAP 0.52.
Exploratory Data Analysis (Safe Mode)
A fail-closed EDA skill that profiles authorized local scientific files, audits missingness, leakage and outliers, and drafts a rigorous report without exposing raw values.
MATLAB / GNU Octave Numerical Workflow Skill
Design, review, and migrate MATLAB or Octave code with strict license gating, static-only safety checks, and reproducibility reporting.
SimPy Discrete-Event Simulation
Build, test, and analyze bounded process-based discrete-event simulations in SimPy with correct event semantics and replication-based output analysis.
PyTorch Geometric (PyG) Graph Neural Network Guide
A hands-on PyG skill covering node/link/graph tasks, custom message passing, heterogeneous graphs, and neighbor sampling for large graphs.
PPTX Scientific Poster Builder & Auditor
Builds macro-free, editable PowerPoint conference posters from an author-approved local manifest, with physical-size, printer, accessibility, and package-security audits.
Cirq Quantum Circuit Assistant
A skill for designing, simulating, and running quantum circuits with Google's Cirq framework.
pysam Genomic File Toolkit
Correct, idiomatic pysam workflows for reading, querying, filtering, and writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, and tabix data.
Scientific Hypothesis Generation
Turns observations into evidence-bounded candidate hypotheses, rival explanations, discriminating predictions, and preregistration-ready analysis plans.
Analytical Method Validation (AMV)
Picks the governing framework (ICH Q2(R2)/M10, USP, CLSI, ISO 17025), then plans the validation study, runs the correct statistics, and structures the protocol and report.
Chaos Engineer
Designs safe, hypothesis-driven chaos experiments, failure-injection code and game day exercises for distributed systems.
video-shotcraft — Cinematic Product Video Pipeline
Turns a frontend project or webpage into a cinematic product promo with Remotion, real page captures, 124 shot cards, beat sync and sound design.
Deep Research (Multi-Agent Research Orchestration)
Splits a research goal into parallel sub-goals, runs them as headless `claude -p` subprocesses, and aggregates plus chapter-by-chapter polishes the results into a standalone report file.
Deep Research
A P0–P7 research pipeline with parallel subagents, a locked citation registry, source-type governance and mandatory counter-review for traceable reports.