Search and read ~11M full-text papers, FDA filings and clinical trials as a read-only virtual filesystem, with line-pinned citations.
Convert coordinates across BED/GFF/VCF formats, normalise variants, and catch assembly mismatches before they silently corrupt an analysis.
Build and audit reproducible NeuroKit2 pipelines for ECG, EDA, RSP, EEG and other physiological time-series analysis.
Design, audit, and export truthful, accessible, publication-ready scientific figures with Matplotlib, Seaborn, or Plotly.
Guides Claude through choosing SHAP explainers, computing and validating attributions, and plotting them correctly.
Picks the governing framework (ICH Q2(R2)/Q14, M10, USP, CLSI, ISO 17025) first, then plans, computes and documents analytical method validation, verification and transfer.
End-to-end Neuropixels extracellular analysis with SpikeInterface: loading, preprocessing, drift correction, spike sorting, quality metrics and unit curation.
Tracks physical units with pint and propagates measurement uncertainty via GUM and Monte Carlo, with local CLIs for budgets, reporting, code audits, and plausibility checks.
Opinionated GeoPandas guidance plus local audit CLIs for CRS, geometry validity, spatial joins, and safe exports.
A PathML 3.0.5 playbook for loading and tiling whole-slide images, building preprocessing/QC pipelines, validating spatial graphs, and planning bounded local inference.
Runs tightly constrained one-hop and endpoint-pinned two-hop queries against the NCATS Translator ARAX API, returning typed relationships with full provenance.
A rigorous skill for planning, validating, restarting, and analyzing FluidSim computational fluid dynamics runs.
A skill that guides loading, cleaning, comparing, and library-searching tandem mass spectra with matchms 0.33.1.
Queries live GenSpectrum LAPIS APIs to report which pathogen lineages are circulating now, how fast they are growing, and which mutations they carry.
Runs DiffDock/DiffDock-L to predict protein–small-molecule binding poses and helps you interpret the confidence scores.
An all-in-one geospatial skill covering satellite imagery, GIS operations, spatial statistics, and Earth observation ML.
Drives the deepTools suite to QC sequencing data, build normalized coverage tracks, and plot heatmaps for ChIP-seq, RNA-seq and ATAC-seq.
Plan studies before data collection — pick the right design, randomize, block, and generate reproducible DOE layouts.
Query and analyze 200M+ cells of public single-cell and spatial transcriptomics data from the CZ CELLxGENE Census without downloading full datasets.
Teaches Claude to read, inspect, and write flow cytometry FCS 2.0/3.0/3.1 files correctly with FlowIO 1.4.0.